Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-1299 in GLB Brain Sun Cluster 14 Table contains all genes in the GLB Brain Sun cluster number 14. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1299 10469 TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast) [Source:HGNC Symbol;Acc:17316] zzz999 1040 CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:HGNC Symbol;Acc:1800] zzz999 84079 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) [Source:HGNC Symbol;Acc:25310] zzz999 145226 RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:19977] zzz999 8900 CCNA1 cyclin A1 [Source:HGNC Symbol;Acc:1577] T 22949 PTGR1 prostaglandin reductase 1 [Source:HGNC Symbol;Acc:18429] zzz999 54112 GPR88 G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:4539] P T 11080 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:HGNC Symbol;Acc:14886] zzz999 64754 SMYD3 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:15513] zzz999 5949 RBP3 retinol binding protein 3, interstitial [Source:HGNC Symbol;Acc:9921] zzz999 64397 ZFP106 zinc finger protein 106 homolog (mouse) [Source:HGNC Symbol;Acc:23240] zzz999 79873 NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:HGNC Symbol;Acc:26194] zzz999 51078 THAP4 THAP domain containing 4 [Source:HGNC Symbol;Acc:23187] zzz999 285600 KIAA0825 KIAA0825 [Source:HGNC Symbol;Acc:28532] zzz999 84217 ZMYND12 zinc finger, MYND-type containing 12 [Source:HGNC Symbol;Acc:21192] zzz999 2052 EPHX1 epoxide hydrolase 1, microsomal (xenobiotic) [Source:HGNC Symbol;Acc:3401] zzz999 23647 ARFIP2 ADP-ribosylation factor interacting protein 2 [Source:HGNC Symbol;Acc:17160] zzz999 8228 PNPLA4 patatin-like phospholipase domain containing 4 [Source:HGNC Symbol;Acc:24887] T 55779 WDR52 WD repeat domain 52 [Source:HGNC Symbol;Acc:25631] zzz999 55352 C17orf79 chromosome 17 open reading frame 79 [Source:HGNC Symbol;Acc:28848] zzz999 120534 C11orf46 chromosome 11 open reading frame 46 [Source:HGNC Symbol;Acc:26798] zzz999 161823 ADAL adenosine deaminase-like [Source:HGNC Symbol;Acc:31853] zzz999 7485 WRB tryptophan rich basic protein [Source:HGNC Symbol;Acc:12790] zzz999 84918 LRP11 low density lipoprotein receptor-related protein 11 [Source:HGNC Symbol;Acc:16936] T 9776 ATG13 ATG13 autophagy related 13 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29091] zzz999 11154 AP4S1 adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575] zzz999 124936 CYB5D2 cytochrome b5 domain containing 2 [Source:HGNC Symbol;Acc:28471] zzz999 202151 RANBP3L RAN binding protein 3-like [Source:HGNC Symbol;Acc:26353] P T 83444 INO80B INO80 complex subunit B [Source:HGNC Symbol;Acc:13324] zzz999 10953 TOMM34 translocase of outer mitochondrial membrane 34 [Source:HGNC Symbol;Acc:15746] zzz999 50853 VILL villin-like [Source:HGNC Symbol;Acc:30906] zzz999 9960 USP3 ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:12626] zzz999 54839 LRRC49 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:25965] zzz999 57562 KIAA1377 KIAA1377 [Source:HGNC Symbol;Acc:29264] T 147463 ANKRD29 ankyrin repeat domain 29 [Source:HGNC Symbol;Acc:27110] zzz999 9666 DZIP3 DAZ interacting protein 3, zinc finger [Source:HGNC Symbol;Acc:30938] zzz999 54682 MANSC1 MANSC domain containing 1 [Source:HGNC Symbol;Acc:25505] P T 51059 FAM135B family with sequence similarity 135, member B [Source:HGNC Symbol;Acc:28029] zzz999 23096 IQSEC2 IQ motif and Sec7 domain 2 [Source:HGNC Symbol;Acc:29059] P T 83759 RBM4B RNA binding motif protein 4B [Source:HGNC Symbol;Acc:28842] zzz999 10714 POLD3 polymerase (DNA-directed), delta 3, accessory subunit [Source:HGNC Symbol;Acc:20932] zzz999 8938 BAIAP3 BAI1-associated protein 3 [Source:HGNC Symbol;Acc:948] zzz999 360023 ZBTB41 zinc finger and BTB domain containing 41 [Source:HGNC Symbol;Acc:24819] zzz999 3305 HSPA1L heat shock 70kDa protein 1-like [Source:HGNC Symbol;Acc:5234] zzz999 29951 PDZRN4 PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:30552] zzz999 2923 PDIA3 protein disulfide isomerase family A, member 3 [Source:HGNC Symbol;Acc:4606] zzz999 22824 HSPA4L heat shock 70kDa protein 4-like [Source:HGNC Symbol;Acc:17041] zzz999 23639 LRRC6 leucine rich repeat containing 6 [Source:HGNC Symbol;Acc:16725] zzz999 161394 SAMD15 sterile alpha motif domain containing 15 [Source:HGNC Symbol;Acc:18631] zzz999 1389 CREBL2 cAMP responsive element binding protein-like 2 [Source:HGNC Symbol;Acc:2350] P T 2532 DARC Duffy blood group, chemokine receptor [Source:HGNC Symbol;Acc:4035] zzz999 51449 PCYOX1 prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:20588] zzz999 84905 ZNF341 zinc finger protein 341 [Source:HGNC Symbol;Acc:15992] zzz999 7718 ZNF165 zinc finger protein 165 [Source:HGNC Symbol;Acc:12953] zzz999 118881 COMTD1 catechol-O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:26309] zzz999 54494 C11orf71 chromosome 11 open reading frame 71 [Source:HGNC Symbol;Acc:25937] zzz999 59084 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) [Source:HGNC Symbol;Acc:13717] T 6330 SCN4B sodium channel, voltage-gated, type IV, beta [Source:HGNC Symbol;Acc:10592] zzz999 83604 TMEM47 transmembrane protein 47 [Source:HGNC Symbol;Acc:18515] T 116832 RPL39L ribosomal protein L39-like [Source:HGNC Symbol;Acc:17094] zzz999 3373 HYAL1 hyaluronoglucosaminidase 1 [Source:HGNC Symbol;Acc:5320] zzz999 4779 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 [Source:HGNC Symbol;Acc:7781] zzz999 83856 FSD1L fibronectin type III and SPRY domain containing 1-like [Source:HGNC Symbol;Acc:13753] zzz999 8991 SELENBP1 selenium binding protein 1 [Source:HGNC Symbol;Acc:10719] zzz999 139341 FUNDC1 FUN14 domain containing 1 [Source:HGNC Symbol;Acc:28746] zzz999 10040 TOM1L1 target of myb1 (chicken)-like 1 [Source:HGNC Symbol;Acc:11983] zzz999 3612 IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 [Source:HGNC Symbol;Acc:6050] zzz999 11334 TUSC2 tumor suppressor candidate 2 [Source:HGNC Symbol;Acc:17034] zzz999 84934 C12orf52 chromosome 12 open reading frame 52 [Source:HGNC Symbol;Acc:25925] zzz999 10003 NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2 [Source:HGNC Symbol;Acc:14526] T 930 CD19 CD19 molecule [Source:HGNC Symbol;Acc:1633] zzz999 4836 NMT1 N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:7857] zzz999 55654 TMEM127 transmembrane protein 127 [Source:HGNC Symbol;Acc:26038] zzz999 9706 ULK2 unc-51-like kinase 2 (C. elegans) [Source:HGNC Symbol;Acc:13480] P T 7220 TRPC1 transient receptor potential cation channel, subfamily C, member 1 [Source:HGNC Symbol;Acc:12333] zzz999 1395 CRHR2 corticotropin releasing hormone receptor 2 [Source:HGNC Symbol;Acc:2358] zzz999 83452 RAB33B RAB33B, member RAS oncogene family [Source:HGNC Symbol;Acc:16075] zzz999 6827 SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467] zzz999 2565 GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Source:HGNC Symbol;Acc:4086] T 6647 SOD1 superoxide dismutase 1, soluble [Source:HGNC Symbol;Acc:11179] zzz999 57648 KIAA1522 KIAA1522 [Source:HGNC Symbol;Acc:29301] T 137994 LETM2 leucine zipper-EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:14648] zzz999 64395 GMCL1 germ cell-less homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:23843] T 55335 NIPSNAP3B nipsnap homolog 3B (C. elegans) [Source:HGNC Symbol;Acc:23641] zzz999 9765 ZFYVE16 zinc finger, FYVE domain containing 16 [Source:HGNC Symbol;Acc:20756] zzz999 54996 MOSC2 MOCO sulphurase C-terminal domain containing 2 [Source:HGNC Symbol;Acc:26064] zzz999 26146 TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 [Source:HGNC Symbol;Acc:17861] T 162989 DEDD2 death effector domain containing 2 [Source:HGNC Symbol;Acc:24450] zzz999 54414 SIAE sialic acid acetylesterase [Source:HGNC Symbol;Acc:18187] zzz999 337880 KRTAP11-1 keratin associated protein 11-1 [Source:HGNC Symbol;Acc:18922] T 11072 DUSP14 dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:17007] zzz999 254050 LRRC43 leucine rich repeat containing 43 [Source:HGNC Symbol;Acc:28562] zzz999 7138 TNNT1 troponin T type 1 (skeletal, slow) [Source:HGNC Symbol;Acc:11948] zzz999 5493 PPL periplakin [Source:HGNC Symbol;Acc:9273] zzz999 51161 C3orf18 chromosome 3 open reading frame 18 [Source:HGNC Symbol;Acc:24837] zzz999 154091 SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 [Source:HGNC Symbol;Acc:18067] P T 146923 RUNDC1 RUN domain containing 1 [Source:HGNC Symbol;Acc:25418] T 275 AMT aminomethyltransferase [Source:HGNC Symbol;Acc:473] zzz999 79041 TMEM38A transmembrane protein 38A [Source:HGNC Symbol;Acc:28462] zzz999 5612 PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440] P T 389 RHOC ras homolog gene family, member C [Source:HGNC Symbol;Acc:669] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.